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… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … the genome as if it were a language, then we can take advantage of existing methodologies developed for natural … And since microbial genomes are simpler to model than large plant or animal genomes, they are a good starting point to …

… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … own perspectives. The interns from this cohort and their JGI mentors are listed below, along with their project focus … Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns …

… most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships with over 80% of land plants, which means they offer a lot of insights into how … HT-SIP is a capability available to request through  the JGI proposal calls . …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. Kuo and Grigoriev encourage scientists to …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed … BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. …

… validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational …

… cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA …

… which affects a number of environments, including plants, soil, and the gut. To better understand the dynamics … cyclic di-GMP in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic … and symbiotic bacterial interactions with animals and plants, or cause metal corrosion in oil pipes. Scientists …

… The products of photosynthesis are easy to point out. Plants, algae and cyanobacteria create the air we breathe … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … said Crysten Blaby-Haas, a research scientist at the JGI and Molecular Foundry, and the study’s senior author. In …