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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes … yield sugar monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut microbiota … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … Combining forces with UC Berkeley to seek elusive gene-editing …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining … Liu Project:  Promoter Characterization of the Bacillota Bacterial Phylum Saray Maeda Mentors: Jonelle Basso, Heejung …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health … forests and the atmosphere. The team learned that some bacterial families carry genes for degrading monoterpenes … ) conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based array …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … shotgun sequencing. The team first tested the approach on bacterial laboratory models to set a reference for its … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The … genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … ran the gamut of sequencing technologies, from making a bacterial artificial chromosome library to long-read …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … with the JGI. Working together, they found most bacterial genomes from water and soil communities were at …
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