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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… not harmful to humans could be even larger. Viruses infect bacteria, archaea and eukaryotes, and they range in particle … recent study  published in the journal  Nature , a team led by researchers at the U.S. Department of Energy (DOE) Joint … to viral lineages, and predominantly in samples from marine (55%) and freshwater (40%) environments. As a result, …
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JGIota: Looking Back at Methane-Making Microbes
Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant matter. So since …
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Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities
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Chloroflexi CL500-11 Populations That Predominate Deep-Lake Hypolimnion Bacterioplankton Rely on Nitrogen-Rich Dissolved Organic Matter Metabolism and C1 Compound Oxidation
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Polar Phytoplankton Need Zinc to Cope with the Cold
… rely on dissolved zinc to photosynthesize. Thomas Mock, a marine microbiologist at the University of East Anglia, … CSP projects publicly available at the PhycoCosm portal . Byline: Menaka Wilhelm   … The U.S. Department of Energy …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully … The process involves “labeling” a given substance by applying a stable isotope to it. The isotopes are … study more samples and provides better resolution by splitting the DNA into more density fractions. It also …
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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Products
… ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a biologically relevant unit from … and improved.  Semi-manual. Assembly, annotation ( IMG ), methylation analysis 131/176 Microbial Single Particle Sort …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green … populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. The top image on the left shows how, from a single bacterial cell (seen here in a glass capillary), researchers …
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Igor Grigoriev
CA … Lankiewicz et al (2023) Lignin deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson … Microbio 2:17087. Mondo et al (2017)  Widespread adenine N6-methylation of active genes in fungi.  Nature Genet.  … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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