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New and Improved: Eucalyptus Reference is Now Accessible
… assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … accurate and detailed comparative genomic analyses.   The Impact There are 900 species of eucalyptus. The trees are …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as … alone. Viruses infect them, and that can have a great impact on these algal blooms. So Vardi and his group study … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … genes of 11 sigma factors in Streptomyces coelicolor . The Impact As an integrative genome science user facility, …
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First Monoploid Reference Sequence of Sugarcane
… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple … information from a sequenced related species – sorghum. The Impact Sugarcane produces 80 percent of the world’s sugar, … platform (http://southgreen.cirad.fr). For the portion of the work conducted by the Joint Genome Institute and the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … armed the plant with an array of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … genera Angophora , Corymbia and Eucalyptus . The Impact The genus Corymbia is endemic to northern Australia … Sequencing and assembly data carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the … essential for photosynthesis, yet still thrives. The Impact This discovery creates a powerful platform for … This work was supported by the Department of Energy (DOE) Office of Science, Biological and …
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Enhanced nutrient uptake is sufficient to drive emergent cross-feeding between bacteria in a synthetic community
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Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
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