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Robert Bowers
… Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … in the mangroves. “Mangroves and their microbiomes are important ecosystems for carbon cycling . If you look at the … the entire cell.” The JGI team then used single cell genomics to analyze five of the bacterial cells on the …
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W. Berkeley Kauffman
… user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic engineering. …
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Tomas Tyml
… traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within … microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary history of life. …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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Genome Sequence of Thermofilum pendens Reveals an Exceptional Loss of Biosynthetic Pathways without Genome Reduction▿ †
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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Worldwide Population Genomics Reveal Long-Term Stability of the Mitochondrial Genome Architecture in a Keystone Marine Plant
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines … novel flow cytometry protocols for targeted recovery of specific microbes. …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … which is known as the aerial surface of plants, is a comparatively understudied area of forest ecosystems as past … chemicals conifers use for defending themselves, which has important implications for plant health. It also provides …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both …   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days … So, the movement of water through stomata is really important. And when those stomata are open, it’s the same …
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