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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … that’s just a little west of Fort Collins, near a city called Leadville. ED:   And, uh, Leadville is interesting. …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. … that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role … Together, these teams provide analysis support and R&D for production and user science. He received his Ph.D. from … as a project scientist and then as a research scientist on projects to develop functional genomic technologies and to …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the … Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing … in the next generation of flowering vegetation. In return for their services, bees eat plant nectar and pollen. Nectar … which have complex, branching chains of polysaccharides called pectin and hemicellulose. While these two …
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Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
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Populus PtrbHLH011 Is a Transcriptional Co‐Regulator Involved in the Activation of Cell Wall Biosynthesis by Iron Deprivation
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  … Our homepage video includes external footage from: University of … All the sampling activities in Antarctica have been performed in the frame of italian expeditions of the Italian …
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Janey Lee
… Janey provides support for custom single-cell user projects and projects within the group. …
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Igor Grigoriev
… Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project …
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