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Back in 2011, JGI-supported researchers published a paper in the journal … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State … Associate Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from …

… from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

… (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool for accurately editing genomes, its … payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers with a powerful addition to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… for capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The … would allow researchers to focus on specific microbes within metagenome samples and associate their sequences with … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation …

… metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … to recover the genomes of these viruses and associate them with their microbial hosts. However, assembling viral …

P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of Canada-Compute Canada facilities. The work (10.46936/10.25585/60001017) conducted by the U.S. Department of Energy …

… ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of Energy …

Data from marine heatwave event may foreshadow climate change … carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …