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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development … (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes … at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… College to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close … of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of … his subsequent book  Thing Explainer, Kaze took on the challenge of explaining her research using the ten hundred most …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational … and evolutionary biology. Dr. Rokhsar’s research is focused on understanding the origin, evolution, and diversity … developmental biology. In addition to this evolutionary focus, his work on plant genomics is targeted towards the …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … science that will help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow … novel technique to access high-quality genomic information using minute quantities of DNA derived from individual …
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The fungus that made itself at home
… the dry rot ( Serpula lacrymans ) is so destructive in houses. A study involving six brown rot fungi reveals the … alternative biofuels and bioproducts. This study lends insights on how the fungus has responded to manmade … to thrive in manmade environments. As reported January 5, 2018 in The ISME Journal , a team led by University of Oslo …
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Tanja Woyke Elected to American Academy of Microbiology
… (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 nominees. The selection process for … Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell methods to … to decode genomes of bacteria and archaea from previously understudied clades, establishing their evolutionary …
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DAS Tool for Genome Reconstruction from Metagenomes
… of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … to address pressing energy and environmental scientific challenges. In Nature Microbiology , a team led by longtime JGI …
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Defining a Pan-Genome for Antarctic Archaea
… sequences from six hypersaline lakes, researchers focused on understanding the genomic variation in haloarchaea … and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme cold, high levels of … the DOE Joint Genome Institute, a DOE Office of Science User Facility, microbial ecologist Rick Cavicchioli and his …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in … 2013 Nature paper , which uncovered nearly 30 major previously uncharted branches of the tree of life. A senior … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the …
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First Monoploid Reference Sequence of Sugarcane
… difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in these crops. For diploid … makes sequencing and assembly of the genome extremely challenging. The reference sequence is useful for mapping the … as a reference. The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … science that will help solve energy and environmental challenges. Within days of the Deepwater Horizon oil rig … between.” To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based …
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