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A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts …

Collaboratory encourages user engagement. The Science In addition to the core set of "primary … time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The …

The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel … This symposium series will provide an overview of the bacterial, archaeal and microeukaryote diversity cataloged …

… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme weather events … conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be …

Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators … researchers walked students through the processes of DNA sequencing, metagenome assembly, and even an introduction to …

Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of the …

Microbial cells infected by viruses undergo metabolic reprogramming. The … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and … approach to infecting and metabolically reprogramming the bacterial host, which was transformed into two very …

Scientists find bee gut microbes have a division of labor when it comes … yield sugar monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut microbiota … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

A “bait and hook” single-cell genomic approach to bioprospecting. The Science … pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on bacterial laboratory models to set a reference for its …

Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even … collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

With a new methodology, scientists are now getting more complete genomic results from single cells. The … usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting … with the JGI. Working together, they found most bacterial genomes from water and soil communities were at …