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A One-Stop Shop for Analyzing Algal Genomes
… is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and … roles in global carbon cycling, are sources of natural products, and have potential as biofuel feedstocks. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about …
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric …
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JGIota: Looking Back at Methane-Making Microbes
… for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions … and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial … producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural …
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Jasmyn Pangilinan
… bioinformatics tools and analysis support for user science, with a focus on metagenomes. Passionate about automation and … reliability, thereby accelerating critical insights for the JGI User community. …
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SIPs with Standards
… are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. But there's a … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … make this technique, SIP, more standardized -- more reproducible, more reusable, and more insightful, for the future …
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JGI-USCCN Strain Sequencing Opportunity
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The Power of One, Amplified
… The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting nearly … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Exploring Polymorphisms Created by Transposable Elements
… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas … of quantity and thickness. Replacing older, thicker ice with younger, thinner ice means more fresh water — and less … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A Model System for Perennial Grasses
… ( Panicum virgatum ) is a candidate bioenergy feedstock with a complex genome with multiple copies of its … soils and has a high tolerance of extreme water conditions such as drought and floods. The U.S. Department of Energy … including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… and characterized a novel phylum-level lineage of archaea with at least two major subgroups dubbed Marsarchaeota. The … into the evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University has been conducting microbial field studies at Yellowstone, and in this …
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