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The PhycoCosm data portal allows anyone to freely investigate the genes of … photosynthetic organisms. PhycoCosm is one of the largest data repositories of its kind, with an interactive browser …

Anna is working on the display and visualization of large omics data. …

Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, … Genomics and Computational Biology … Education … Selected Publications … Awards and Honors …

Marcel is in charge of several production pipelines (gene calling, functional annotation … metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …

On February 17, 2021, JGI and the Environmental Molecular Sciences … We work with start-ups and mature companies, as long as the data are not proprietary. In addition, the JGI has a … range from traditional single cell sequencing and mini-metagenomics to more targeted approaches, such as …

Machine learning methods were applied on sequenced fungal … of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team …

Registration and Agenda Coming Soon!  Hosted by the DOE Joint … Natarajan Google Olga Zhaxybayeva Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel microbial …

The JGI Engagement Webinar held November 5, 2020 (watch the  video … it makes its sequencing, synthesis, metabolomics and data analyses capabilities available on a peer-reviewed competitive basis via its  User Programs . Q:  Are …

WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical … is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI … event. “The tools we use to process and analyze these data are diverse and porting these codes to GPUs present …

Across four forests, researchers have leveraged data from … fungi in these environments. “Now with these new tools — metatranscriptomics, RNA sequencing of soil RNA — we can …