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Supercharging SIP in the Fungal Hyphosphere
The process involves “labeling” a given substance by applying a stable isotope to it. The isotopes are … study more samples and provides better resolution by splitting the DNA into more density fractions. It also … a wide variety of microbes, including both bacteria and archaea, actively engaging with the fungi — highlighting the …
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Massie S. Ballon
Area representatives to Berkeley Lab’s Inclusion, Diversity, Equity & Accountability (IDEA) Chairs Council.   …
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Digging into Microbial Ecosystems Deep Underground
… in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of …
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How Filamentous Fungi Sense Food
… model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley … to reconstruct and model gene regulatory pathways used by the filamentous fungus  Neurospora crassa, and to … networks in the model fungus  N. crassa , a team led by N. Louise Glass at the University of California, Berkeley …
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Data Ecosystem
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Axel Visel
… … 2021 LBNL Director’s Award for Exceptional Achievement in Diversity 2014 LBNL Director’s Award for Exceptional … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … C, Blow MJ, Cohen JC, Rubin EM, Pennacchio LA (2010). Targeted deletion of the 9p21 non-coding coronary artery …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar featured  … resources. Q:  Where can I get information for funding by JGI? A: The JGI is not a funding organization. Rather, it … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Natural Prodcast Episode 6: Marc Chevrette
… more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s presentation from the 2019 JGI … conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And they’re really excited about … similar to like human crops like corn. There’s low genetic diversity in the crop. So they’re susceptible to disease. …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The … a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and … these fungi use to break down wood, and compares genetic diversity between cultivated and wild shiitake populations. …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… and environmental remediation—all priorities identified by the DOE Office of Biological and Environmental Research … for bioproducts to support the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms … might contribute to the emergence of new pathogens. “ By sharing our vision broadly across Berkeley Lab, with …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Brassicales Genome Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on … three groups: cyanophages, bacteriophages, and giant algal viruses.  The approved proposals started October 1, 2020 and … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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JGI Workshops at PAG
… of algae, and sampling of the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the …
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