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A Model System for Perennial Grasses
… hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study … at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the culmination of nearly a decade of work to develop genomic resources for drought tolerance in perennial grasses. The team …
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John Vogel
… his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts comparative … and practical significance of plant pan-genomes including understanding polyploid genome evolution in a pan-genomic …
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JGI Hosts GPU Hackathon in May
… processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the … is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI …
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The fungus that made itself at home
… Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar … environments. As reported January 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and … researchers at the Joint Genome Institute, a DOE Office of Science User Facility, compared the genomes of two strains …
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Halophytes and heavy metals: A multi‐omics approach to understand the role of gene and genome duplication in the abiotic stress tolerance of Cakile maritima
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … his team then linked those species-level observations with data on microalgal communities across different ocean … from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine … Partner summer interns at the JGI. What did you do for your summer vacation? …
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … factors and even other organisms can fuel a deeper understanding of these transcriptional regulatory networks. …
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Hiroshi Otani
… in actinomycetes. He is particularly interested in understanding how, when and why microbes decide to produce … H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 … Savchenko, A., and Eltis, L.D. (2016) The activity of CouR, a MarR family transcriptional regulator, is modulated …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… collaboration is available for licensing. The Science In  Nature Communications , researchers describe a … separating urine from other waste streams and recovering resources that could be used for products such as agricultural … million annually.  The team is working on developing new microbial strains that can synthesize other bio-based …
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The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome
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Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
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