Results

Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic …
Learn more
I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … et al. IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, …
Learn more
Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
Learn more
Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
Learn more
A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
Learn more
Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
Learn more
Triggering Morel Fruiting
Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …
Learn more
Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … DOE Office of Science National User Facilities in a single project. … This work was supported through a USDA NIFA award …
Learn more
The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The … moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each …
Learn more
Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the …
Learn more
iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … The work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
Learn more
Improving genome assemblies by sequencing PCR products with PacBio
Learn more