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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the human language—are well positioned to help enhance our understanding of life’s genomic code, advancing DOE … And since microbial genomes are simpler to model than large plant or animal genomes, they are a good starting point to …
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JGI Hosts GPU Hackathon in May
… processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under contract number …
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JGI@25: From Life at the Extremes to Editing Genomes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection …
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JGI on the 2020 Highly Cited Researchers List
… in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 researchers working in 21 fields … of 135 fungal sequenced genomes to understand how plants and fungi developed symbiotic relationships, and how … for  M. sinensis can both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such …
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Gene Expression: From On-Off Switch to Dial
… gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library … published in the  Proceedings of the National Academy of Sciences (PNAS), offers more ways for scientists to explore … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Massie S. Ballon
… aims to broaden awareness of and access to JGI public resources and the DOE mission, as well as help cultivate the … collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping … portfolio spans a wide range of topics beyond translating science, including crafting technical reports, developing …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… to the worldwide scientific community through its  User Programs on a competitive, peer-reviewed basis. Speakers and … a keynote speaker addressed the conference, sharing the journeys of their research careers, and showcasing the broad … of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced Bruce …
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A User-Centered Approach to Accessing JGI Data
… launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for … limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made … and NMDC? A: We have reached out to KBase regarding use of our search API. They have expressed an interest in using …
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Supporting Global Research into Actinomycetes
… in soil and can be used as biocontrol agents and to promote plant growth. It is the largest genus within Actinobacteria … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, as well as a member of  its Secondary … Prodcast podcast , where she talks about this community resource. ) “Most people study actinomycetes because they …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … for non-model organisms, modulating microbe-microbe and plant-microbe interactions in various environments to … joining the JGI, Dr. Yoshikuni was co-founder and chief science officer at a clean technology startup, Bio …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… communities in carbon cycling, in interactions with plants, and as drivers of methane production, nutrient … is the interim director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. …
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