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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … that will help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow Laboratory …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on … A, Chu K, Ritter SJ, Reddy TBK, Mukherjee S et al. IMG/VR v4: an expanded database of uncultured virus genomes within a …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment … and Environmental Research under contract DE-FC02-07ER64494. EG is supported by the NIGMS Biotechnology Training …
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Filling in the Plant Tree of Life
… we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to drive more productive food, medicine, and bioenergy crops. But most available genomes are …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper … an array of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in … Provincial Natural Science Foundation of China (grant LY21C130007 to D.X.).the Australian Research Council (grants …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel … to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better …
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of … to use billions of tons of the carbon dioxide trapped in biomass each year to do so. As such, they are considered …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is … the factors and mechanics of gene expression in over 400 fungi species. “Fungi are the masters of adaptation,” … Evolution . Mol Biol Evol. 2022 Feb 3;39(2):msab372.doi: 10.1093/molbev/msab372.   Byline: Ashleigh Papp …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the specialized …
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