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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Polar Phytoplankton Need Zinc to Cope with the Cold
… some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called … other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Better Genome Editing for Bioenergy
… in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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Ancient Algae Reveal Secrets of Plant Evolution
… , scientists have enhanced our understanding of how early plants transitioned from water to land. Key gene … of how plants adapted to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Cataloging the Microbes that Manage the Health of River Systems
… provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , … States. They also provided multiple access points to the information. The team harnessed a community-science program to … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other … participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of …
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Finding the Fermenters
Most organisms use oxygen to convert food into energy. However, in environments with little or no oxygen, life had … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve … advances in sequencing technologies applied to the effort. The Impact Found on all continents, including … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene … research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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