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JGI@25: From Life at the Extremes to Editing Genomes
National Laboratory – jointly the Nobel Prize in Chemistry with Emmanuelle Charpentier of the Max Planck Institute! … This is the first science Nobel awarded to two women, with Charpentier and Doudna bringing the total number of … system. For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos …
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JGI-UC Merced Interns Share Their 2021 Experiences
… interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, … this program’s history, two interns returned to re-engage with their mentors from the previous year and continue … The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a career in …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… in science. Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and … that I’ve been in my PhD program, I’ve been really focused with academia. And so this was the first time I was … my interest in bioformatics, so that’s what I’m gonna take with me to the future.  Shari Larsen : I didn’t grow up with …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … unique challenges for the community. JGI is partnering with NVIDIA and Oak Ridge National Laboratory (ORNL) to make … aren’t getting any smaller and we need to keep pace with changes in industry/DOE Advanced Scientific Computing …
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Trent Northen
Berkeley Lab in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass … research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle … D, et al.  SIMILE enables alignment of tandem mass spectra with statistical significance. SIMILE enables alignment of …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
Find recordings and recaps of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , … two kinds of scientific revolutions,” Ari Patrinos opened with this quote from Thomas Kuhn in his 25th Anniversary … project, which spanned nearly two decades, was filled with ups and downs, challenges and triumphs, and a lot of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… amount of what’s allowed in drinking water. However, in the deeper sites, toxic chemicals remain.  To identify the …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… of California Santa Barbara. So plants don’t break down without a fight, but it’s an important battle to fine-tune. … the energy they store.      Since 2012, O’Malley has worked with the JGI to understand the enzymes these organisms use … a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, O’Malley and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at … or biological samples (like cell media or lake water) without doing a metabolite extraction? Or are these samples … contain salts and other contaminants that interfere with metabolomics analysis.  Q: Can you give us an idea …
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The JGI Data Portal: Improving User Experience
… , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers with unique areas of focus and data and computational needs. … users who were seeking to download all the data associated with the latest version of the plant portal, weren’t able to … on the download experience from MycoCosm and PhycoCosm, with the intent of eventually transitioning to work on IMG …
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Help from Citrus’ Bitter, Hardier Cousin
Citrus , appeals in other ways. It better tolerates cold, withstands pests, and, especially tantalizing, resists a …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to … Who can apply for this proposal call? A(nswer): We work with people from all around the world. We work with … range from traditional single cell sequencing and mini-metagenomics to more targeted approaches, such as …
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