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Simon Roux
… approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. The ISME Journal … Giant virus diversity and host interactions through global metagenomics. Nature 578, 432–436. …
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Forming Scientific Connections and Building Community
… had to say about their experiences and what they’ll take with them as they go forward in their careers.   Listed … Being an intern here has allowed me to make connections with the top of the top scientists in their fields. I have … great meeting the wonderful people who work at JGI and learning about their research.” Mentor: Juan C. Villada …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… of quantity and thickness. Replacing older, thicker ice with younger, thinner ice means more fresh water — and less salt — near the surface where algae grow. Armed with a better understanding of the alga’s stress resistance … range of habitats — from brine pockets and melt pools, and within the water column. They are also the primary producers …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic … can affect pathogenic and symbiotic bacterial interactions with animals and plants, or cause metal corrosion in oil … external illumination, making them difficult to use inside deep tissues. Additionally, all plants, many bacterial …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… found inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its kind ever … than 6,000 mitochondrial sequences previously unrecognized within existing public databases and recovered more than … the full kingdom, they are well-suited to train machine learning models that predict biological traits from DNA …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… next-generation feedstocks through CRISPR-edited poplars with optimized lignin, engineering heat-resilient algae for … Ecological Observatory Network (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. Taking the JGI’s call for large-scale …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … the researchers insights into how they might interact with their hosts, and how those interactions may in turn … been co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …
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User Advisory Committees
… we nurture in our workplace and seek to establish with our stakeholders. The guiding principles for … community, and promotes communication and collaboration within the user community. …
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Webinar: MycoCosm Tutorial
… on the scientific questions asked and whether they are within DOE mission areas of bioenergy, carbon cycling, and … https://phycocosm.jgi.doe.gov/oomycota ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups … to use the Browse page tool to compare your own data with the JGI database? A: You can use custom tracks menu …
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Ancient Algae Reveal Secrets of Plant Evolution
… — ultimately allowing them to adapt to life on land. Learning that these genetic tools existed in close algal … to thrive outside aquatic environments. The Impact A deeper understanding of how plants adapted to terrestrial … resilient crop varieties able to grow in marginal lands and with minimal resources. Enabling the use of non-arable land …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… Zhong Wang and Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant … of the fifth summer of its flagship education program with UC Merced. JGI Director Nigel Mouncey and program … has been a pillar stepping stone in my bioinformatics learning and career development,” she noted. …
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