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Natural Prodcast Episode 23: Aaron Puri
… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … great guy named Matt Bogyo in grad school synthesizing activity based probes which are basically molecules that … compounds like methanol and methane. And I really dove into microbial physiology and microbial genetics, and really away …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… the air, large swaths of the bleached, skeletal remains of trees can be seen. These plagued patches have become … in losses , including the death of tens of millions of trees in California alone. With the genome sequence in hand, … In one year alone, 500 people participated in SOD Blitz activity, and these data were subsequently used by three …
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Natural Prodcast Episode 18: A CSP Primer
… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual CSP … in a way that helps the PI, I think. For metagenomes and microbial genomes, in part because of the scale of how much …
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Frequently Asked Questions: Project Management
… for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) … information and institutional affiliations for individuals associated with your proposal. Find our Publications Policy …
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CSP Functional Genomics
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CSP New Investigator Call
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CSP Large Scale Call
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Tracking the Origins of Methane-Producing Microbes
… recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … Following that work, they partnered once more with JGI Microbial Program head Tanja Woyke and her Single Cells team member Frederik Schulz to screen the microbial communities collected. The team noticed some of …
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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in … to activate multiple chemical production pathways. By tracking gene activity and chemical output over time, the team mapped how …
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Data Policy
… of use-restriction expires. All use-restricted data have an associated date of use-restriction expiration. …
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Association mapping, transcriptomics, and transient expression identify candidate genes mediating plant–pathogen interactions in a tree
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