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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … them on a regular basis. So they are full of terrestrial microbes. So they’re open ecosystems. They’re not sealed off … in the cave project just now switching from intermicrobial interactions, studying intermicrobial interactions by …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … about natural products and the science and scientists of secondary metabolism. Welcome back for our second season … it’s like these molecules can just mediate so many kinds of interactions. And by understanding them, we can promote the …
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Micro-Scale Applications Group
Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling strategies that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic …
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CSP Large Scale Call
… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon and …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … are using Altiarchaea as a model system to study virus-host interactions. Approximately 150 archaeal viruses had been …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … scale is pretty unique in that we don’t just sequence one microbe for you, we sequenced thousands for you or thousands … where smaller proposals may be a fit. Still not 20 many microbes. We still we work in plates, right? We’re a high …
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Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria
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Web of microbes (WoM): a curated microbial exometabolomics database for linking chemistry and microbes
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in biomass each year … applied mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … into practical applications, including sustainable biofuels, biomaterials, natural products, and environmental …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber to be a … even in primary metabolism or in certain snips of viruses or something. I don’t know. Then I think making sure …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … water-quality regulation. Focusing on the rhizosphere and interactions between the trees, microbes and soil chemistry offers insights into how these …
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