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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But … depths and relying on different ways of living. The Impact Microbes help regulate the global carbon cycle — fixing, …
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Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … come from livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded … to understand. A better understanding of rumen and the microbes that live there can drive solutions into stemming …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … are using Altiarchaea as a model system to study virus-host interactions. Approximately 150 archaeal viruses had been …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … about natural products and the science and scientists of secondary metabolism. Welcome back for our second season … it’s like these molecules can just mediate so many kinds of interactions. And by understanding them, we can promote the …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … them on a regular basis. So they are full of terrestrial microbes. So they’re open ecosystems. They’re not sealed off … in the cave project just now switching from intermicrobial interactions, studying intermicrobial interactions by …
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet technology in order to enhance the … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) …
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JGI Portals
… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … conifer needle microbiomes. The survey showed what these microbes are equipped to do on the leaf surface. More … including resilience to stress, decomposition, and interactions between forests and the atmosphere. The team …
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Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … scale is pretty unique in that we don’t just sequence one microbe for you, we sequenced thousands for you or thousands … where smaller proposals may be a fit. Still not 20 many microbes. We still we work in plates, right? We’re a high …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … genomic information from plants, fungi, algae, non-medical microbes, microbial communities, and other relevant …
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