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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a … quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … to move from cataloging microbial diversity to experimental characterization and validation of the functional potential …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … “Once you have a landing pad in a strain, you can deliver multiple types of payloads, such as individual genes, whole … University of British Columbia, recently deployed CRAGE to rapidly label  E. coli  in order to monitor population …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy of Genomic Technologies …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … to the second episode of the Natural Prodcast. This is part 2 of our “primer” episode, so if you ended up here somehow … that – I want to say like lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. … from The Ohio State University and the University of Michigan studying how virus infections cause significant … opportunity to combine the power of genomics and molecular characterization offered at multiple user facilities …
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Transposon signatures of allopolyploid genome evolution
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a … a microcolony, microbial aggregate, or a specific subset of free-living cells. Extracted DNA may be amplified using …
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Natural Prodcast Episode 15: Katherine Duncan
… you buy that in the shop. And then there’s some kind of freeze-dried microalgae like spirulina that you kind of buy … both of those things have still very much done to be excellently. Dan Udwary: For sure. Kate Duncan: Not that … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop Populus
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