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Natural Prodcast Episode 5: Brad Moore
… the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … So we got the Joint Genome Institute interested in a marine obligate actinomycete bacterium called Salinospora . This new genus was discovered by friends and colleagues at the Scripps Institution of …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that integrate genomics with nanoscale science, accelerating discoveries … challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal submission …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at … and metabolomics through its data portals. Supported by the DOE Office of Science's Biological and Environmental …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … introduction in natural products, so I might just start out by asking you know how did you get started. I know you’re … that as a readout of activity. And I was really fascinated by that. And really more generally from undergrad the …
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User Programs
… accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich … from agricultural research. Several species of Olpidium are obligate endoparasites of some common crops, such as lettuce … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Natural Prodcast Episode 16: Marcy Balunas
… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … you bring a unique perspective too? And so I was fascinated by – we spend a lot of time as natural products chemists and … this the needle in the Haystack. Because if we have 10,000 features which one do we look at because we are a small lab? …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … openness, candor, transparency, and creativity framed by a positive, constructive and professional mindset, so … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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A Step Toward Controlling Soybean Rust
… The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Mapping the Earth’s Hidden Fungal Kingdom
… Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … mushrooms and yeasts, outnumber their ancient relatives by nearly 10 to one in sequenced collections. Yet the … evolutionary trees and overlay them with genomic features. This allows for revealing patterns that would be …
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions … merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of the … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a …
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