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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … Z. & Rubin E.M. Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science 331, 463-7 (2011). … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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FICUS-NERSC/KBASE
… the JGI makes the assemblies, gene annotations, and analyses available to the community at large. In most cases where the JGI provides more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, cloned into …
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Synthesis
… into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … develops data science tools for workflow management and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …
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Synthetic Biology Lab
… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … mining and sequence design with scaling the production of large, difficult to synthesize constructs such as those … applications.  We are interested in:  characterizing novel enzymatic activities using phylogenomic driven …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … the science that can be done with the   Biological Small-Angle Neutron Scattering (Bio-SANS) instrument …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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User Support Analysis Group
… epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing products performed at scale. Our group also performs ‘proof-of principle’ research …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … Sure. ALISON NARAYAN: And so we usually start on small scale in the lab. So we’ll run things in like little … thing. There’s something about watching this, like, set up thousands of reactions at a time, that’s just like so …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … you in support of team science and service for the good of humanity. Sincerely, The JGI Leadership Team : Nigel …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … Sample QC Protocol JGI’s Total RNA Sample QC Protocol JGI’s Small RNA Sample QC Protocol DNA Extraction 101 : tips, …
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