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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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Natural Prodcast Episode 3: The Primer, Part 3
… developed to the point that you could understand the genetics of secondary metabolism, it became possible to do … DAN: Well, it is and it isn’t. It depends on different systems of secondary metabolism and the things that are in … to go ahead and, and synthesize those genes within a model organism like E.coli , and have it produce the …
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Natural Prodcast Episode 10: A Primer on Genome Mining
ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … peptides, remember, are big, complicated enzyme systems that really just exist to pull an amino acid out of …
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Natural Prodcast Episode 16: Marcy Balunas
And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … think might be happening, we’re sort of converging on this model of this being called an egg defense model. And so … is usually going to be through synthetic biology or genetic engineering. But I think from what I’ve read you’ve …
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New Lineages of Life Group
… and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …
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Natural Prodcast Episode 6: Marc Chevrette
… to unpack experimentally. But there’s a couple of different systems where people have made strides in that area. Where I … and antibiotic activity, and it fits pretty well a model that was developed for macro organisms like rabbits … really similar to like human crops like corn. There’s low genetic diversity in the crop. So they’re susceptible to …
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Microbial Program
… inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … single cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single … diverse bacterial and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function …
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EARLY FLOWERING 3 and Photoperiod Sensing in Brachypodium distachyon
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N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon
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CSP Large Scale Call
… sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data … are of relevance to bioenergy-related feedstock crops or model plants. Projects targeting marine systems must clearly …
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Brachypodium as an emerging model for cereal–pathogen interactions
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A Xyloglucan Backbone 6-O-Acetyltransferase from Brachypodium distachyon Modulates Xyloglucan Xylosylation
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