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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP … peer-reviewed for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy … welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … like massive brownouts in California when you’re doing the computational analysis of metagenomes. DAN UDWARY: Well, the …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate the … provides customized analysis, the JGI also participates in publication of results. … facilities, who consider technical feasibility and readiness to begin work.  During scientific peer review, …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This … between those two groups and the ways in which they approached scientific problems. And so that sort of opened … anyway, to anywhere tackle that. So you’ve got to do it computationally. Right? So where do we start with that? …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar … to the data made available through this multidisciplinary approach allows researchers to conduct a wide variety of … U.S. Department of Energy, Office of Science, Biological and Environmental Research. Oak Ridge National Laboratory is …
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A User-Centered Approach to Accessing JGI Data
… launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … , which guide the relationships we nurture in our workplace and seek to establish with our stakeholders. In working … on sustaining our record of excellence and respect, and for principles of integrity, safety and reliability. As …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint … of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … that’s making these compounds? So in the end, we took an approach that was kind of a simplified metagenome sequencing …
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Partners
… The JGI leverages its existing partnerships and develops others providing complementary expertise to … has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further … plant and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy Research …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint … what’s exciting and what’s not? MARC: Yeah, so one of the approaches that Tiny Earth is using to be different than … For sure.  MARC: We were basically, Dan and I and one other computational biologist were tasked with looking at, you …
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