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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in … to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper … Genomics of Energy & Environment Meeting on September 1, 2021. Register here to hear him and others.   Byline: Massie …
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Microbiome Data Science Team
… and visualization of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global … of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509. Danko D. et al. (2021) A global metagenomic map of urban … Reveal Thousands of Small, Novel Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) … Viral EcoGenomics & Applications (VEGA)  …   The JGI is represented at …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, … Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing … dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. … P. psychrophila on PhycoCosm … Datasets …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … chromosomes. These sequences account for approximately 12% of the total human genome, which itself was finally …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established … in the global microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He … UK and Lawrence Berkeley National Lab … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single … plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria …
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Nigel Mouncey
Society for Industrial Microbiology and Biotechnology in 2022-2023. … Nigel Mouncey is the Secondary Metabolites … catalog of Earth’s microbiomes. Nat Biotechnol. 39:499-509 Hurley A et al. 2021. Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery. mBio. 12:e03432-20 Wood-Charlson EM et al. 2020. The National …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a … of Nobel Laureates and Students in Lindau, Germany, 2009 … Grosjean N, Zhang L, Kumaran D, Xie M, Fahey A, … aminopeptidase. Cell Reps 39 (7), 110834. (Subject of News and Views Article in Nature 608, 38-39 (2022) and …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards graduate students the opportunity to pursue part of … were selected to carry out part of their thesis research at 12 host national laboratories or facilities between 3-12 …
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Data Ecosystem
To expand access to integrated data, improve tools and … ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC …
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