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… do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … metabolites using cultures. And one of the reasons we’re excited about it is because we can see new chemistry … out in the universe of natural product isolation. And in listening to some of the other podcasts I will say that my …

… … DAN: You’re listening to the US Department of Energy Joint Genome … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … natural product gene clusters, and we’re all really excited about that, and I think that comes across in the …

… two authors called Firn and Jones. I’m sure that people excited in natural product biosynthesis overall have had read … integrated metabolism, by Firn and Jones, because it’s highly tightly integrated in order to lead to the final … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics … team at the Supercomputing conference, SC’18, led by researchers at Oak Ridge National Laboratory. Dr. Fagnan has …

… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse … Our work varies in scope from the development of highly customized analysis workflows for new product types, …

Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews … the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the …

… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … systems, specifically the acyl homoserine lactones.  If you listened to Betsy Parkinson’s recent episode , you’ve heard … were looking at these genomes for the first time getting excited about this. And so you find these clusters. And one …

… state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … sparked your interest, and you want to learn more, then I highly recommend David Hopwood’s book called  “Streptomyces … diversity that we have at our fingertips. So I’m very excited to learn more and hear more about what JGI and …

… … DAN: You’re listening to the US Department of Energy Joint Genome … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – … genes, and sometimes they still don’t make anything. Most researchers don’t talk about that. But that happens not …

The human-centered, agile collaboration between the JGI and the information technology company Truss has … Phytozome , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers with unique areas of focus and data and … who is part of the joint JGI/Truss team. Based on Google Analytics data, the team noticed that a large percentage of …

TAKEMURA: Hey, Dan. DAN UDWARY: So Alison, I’m very excited today. Usually when we do these interviews, most of … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … challenge is, as the listeners know, even when you find a highly potent active compound that has a good cytotoxicity …

… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure … that go well beyond genome annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and …