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… your Project Manager or [email protected] . … 1) Review JGI sample QC requirements and protocols Obtaining … Protocol JGI’s Small RNA Sample QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for … (or completes the form online) PM submits metadata to JGI database for shipping approval (n/a if using web-based form) …

And I set that up. And we finally got that to work 10 years later. But in the meantime there, we had people … 20 analogs at this point. And Casey and Nikolaou synthesized the everninomicin at Scripps, I guess, 22 years ago. … BACHMANN: Everything starts with genome mining. And a great database. DAN UDWARY: All right, awesome. So you have a …

But one of the things I did want to make sure that I emphasize is that the natural products field, or secondary … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what … who was working on these things in the very early 1900s.  DAN: And so he has drawn what he called …

… pairs. It was not linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: … them that it looked to be of a certain number of modules in size, they then quickly were able to then solve the … that then has a big impact. You know, when these toxins are released, and they get into the environment you mentioned, …

… and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP … sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, depending on the … programs? … How much will it cost me to sequence or synthesize my target or obtain metabolomics data? … Should I …

… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, … within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal contained …

… so there are– I hesitate to make a guess but maybe 50 to 100 different strains and they are in individual tubules.  … monocultures but the whole of the organ which is about the size of your pinky nail has maybe 50 to a hundreds of these. … bacteria that protect the fungus. And we talked to Marc Chevrette in, I think, episode seven [Editor’s note: It was …

… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are … The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was …