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… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …

… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …

… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that … this identification, metabolomics enables functional genome annotation, improves understanding of the role small … variety of experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well …

… Below are a list of webinars that can help you through the submission process by … webinars here . You can find additional webinars covering how to use our data portals here.  …

… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … but they’re not always immediately apparent. Similarly, the microbes found in plant roots may have unknown roles. Some … Institute for Plant Breeding Research (MPIPZ) studied how fungi associate with roots in A. thaliana plants. The …

… genomics research and to help them translate genomic information into biological function.  The emphasis is on projects … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … DOE mission relevance , proposed data usage by the applicant/community, and track record of the applicant.  Learn …

… most common forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … the interactions that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and …

… to transfer into other plants because some of its enzymes can transform diverse terpene substrates into many products; … synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the bioenergy crop switchgrass. The team confirmed just how important zealexins are to maize health. Infections with …