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… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that … this identification, metabolomics enables functional genome annotation, improves understanding of the role small … JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using …

… A deep dive into microbial genomics reveals one bacterial species is … to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how can SAR324 … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, …

… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials proposal call . This … The JGI supports remote users. Users conduct experiments in their own labs or collect field samples. Depending on the … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. …

… expertise to support the global research community in studies of complex biological and environmental systems. … our service to the community through responsibly managing our people and resources. Our vision is to lead AI-driven genomic innovation to advance biotechnology.   …

… The JGI is leveraging its current partnerships to offer new capabilities and … interact with each other and with their environment and help unravel these complexities  This ecosystem serves users … intelligence and other tools. By bringing users together through our systems, we build far-reaching …

… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … to free up their nutrients; mycorrhizal symbionts shuttle water and nutrients to trees; plant pathogens colonize …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … a description of the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

… Data from marine heatwave event may foreshadow climate change impact on … one began in late 2013, when a large patch of warm ocean water about a third the size of the United States began … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of … Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of … a bloom of  E. huxleyi , it bursts the algal cells like water balloons, releasing vast amounts of calcite and …

… Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can affect how microbes cycle nutrients and …

… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … Environmental Research (BER) grants DE-SC0023084, DE-SC0021350, and DE-AC02-05CH11231. Partial support by US National …