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P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of Canada-Compute Canada facilities. The work (10.46936/10.25585/60001017) conducted by the U.S. Department of Energy …

… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … to free up their nutrients; mycorrhizal symbionts shuttle water and nutrients to trees; plant pathogens colonize …

A deep dive into microbial genomics reveals one bacterial species is … to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how can SAR324 … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can affect how microbes cycle nutrients and …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … and the environment. At its core, the program investigates photosynthesis — the process that transforms solar energy … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … box of protective tricks. Nature Reviews Microbiology 20 (5), 255-255 Schulz et al. (2020) Giant virus diversity and …

Data from marine heatwave event may foreshadow climate change impact on … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of the U.S. Department of Energy under Contract DE-AC02- 05CH11231, the G. Unger Vetlesen and Ambrose Monell …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … Environmental Research (BER) grants DE-SC0023084, DE-SC0021350, and DE-AC02-05CH11231. Partial support by US National …

… is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging … feedstock crops or model plants. Projects targeting marine systems must clearly demonstrate relevance and translatability to freshwater, coastal, or terrestrial systems. … All proposals will …

… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … dhesion and  r estriction  e ndonuclease domains—of up to 8,500 amino acids in length. These were actively synthesized …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … Proposals accepted before FY22 are transitioning away from producing use-restricted data. JGI proposals typically …