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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s history, from …
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An Earth Month Look at Sustainability Efforts at the JGI
… Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the Lab, … program manager for  Sustainable Berkeley Lab (SBL). By 2030, Berkeley Lab  aims to cut its greenhouse gas emissions in half, relative to its 2015 baseline emissions.  Reaching that goal will mean …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The planet’s … For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … the crop and its microbiome. For three consecutive years (2016-2018), researchers conducted large-scale experiments in …
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Natural Prodcast Episode 23: Aaron Puri
… was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix … access to the whole sigma catalog of precursors in their 12C form. You can feed those and look for incorporation in … genes and an unusual acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. …
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JGI Portals
… Notices Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret any inconvenience. … Portal was replaced with the Data Portal and sunset in 2026. The Genome Portal was designed to provide unified access …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… broad distribution indicate multiple, independent origin events? Do the cytotypes react differently in response to …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, … efficient at photosynthesis, a concern as extreme weather events become more frequent. “A big part of the Danforth … agriculture, learning, and commercialization. Opened in 2008, HudsonAlpha’s vision is to leverage the synergy …
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Natural Prodcast Episode 2: The Primer, Part 2
… to the second episode of the Natural Prodcast. This is part 2 of our “primer” episode, so if you ended up here somehow … molecules and their discoveries over a stretch from 1940 to 2000. As you can see, from the 1940s, into the 50s into the …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after … into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a … UC CORO participant, 2021 Member of the Networking and Information Technology …
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Natural Prodcast Episode 3: The Primer, Part 3
… and listen to the first two parts ( part 1 is here and part 2 is here ) so you understand what’s happened so far in the … me to check her stat and she was absolutely correct. Since 2010 there have been eight new antibiotics added to the … from your cultures, but then you’re going to find another 20 or 30 secondary metabolism pathways that you didn’t even …
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New Research Sheds Light on Diversity in the Deep Sea
… funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 and DBI-2047598 to K.A. We thank the Department of Energy Joint …
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Natural Prodcast Episode 22: Alison Narayan
… has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our product, and one of those oxygen atoms from O2 ends up as a molecule of water. DAN UDWARY: Mhm. So … Chemoenzymatic Tropolone Synthesis”, (preprint)  ChemRxiv.  2023.   doi: 10.26434/chemrxiv-2023-lvngd “Enabling Broader …
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