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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge … sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …
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Publication Policy
… of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … of the journal in which the research is published. The JGI expects that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce …
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Frequently Asked Questions: Proposal Submission
… go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … or longer to obtain with no guarantee of approval.    JGI staff are not eligible to submit proposals, or to be listed as co-PIs or collaborators.   JGI’s standard User Agreement must be signed before work can …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible … — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics …
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Institutional User Agreements
… must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … for the signing official. User Institutions with an active JGI User Agreement older than January 2024 will be required … required paperwork to your institution. (Samples of the JGI User Agreement , JGI User Agreement for Federal Agencies …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Webinar: Introducing the BioSANS capability
… the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the … Scattering (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following … GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed …
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Natural Prodcast Episode 14: Nigel Mouncey
… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, of … using these together along with all of our computational tools to really build out much more of an integrative …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Data Policy
… the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … of data to support their use by those generating data. The JGI Data Policy applies to research data and analysis … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted …
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