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Fungal & Algal Program
… environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … This research helps translate their genomic potential into practical applications, including sustainable biofuels, … The Fungal & Algal Program harnesses cutting-edge sequencing technologies and advanced genomic analysis to …
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Understanding Wildfire Recovery, Starting in Soil
… extreme wildfires, more and more forests are under threat. Understanding which microbes in the soil persist after a … of a recovering soil microbiome provides a window into how to model and track the forest recovery process.  … a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… in  New Phytologist , researchers have pioneered new understanding of which fungi take on certain functions at … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for … found in soil samples, and assembled those RNA transcripts into a metatranscriptome. Overall, they found that despite …
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JGI Portals
… critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for … access to information regarding genome and metagenome sequencing projects, and their associated metadata, around … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes …
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Plant Microbial Interactions Group
… single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better understand the … strains, whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified … simiae WCS417. One suggested function of these phage genes is the modulation of their bacterial host to colonize …
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JGI announces 2024 Functional Genomics awardees
… research from reseachers who translate genomic information into biological function. Through our CSP Functional … the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into … red-light energy capture, enhancing atmospheric carbon sequestration into sustainable biomaterials, and developing …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for covering the … such as fully annotated genome assemblies or differential gene expression results. For DNA synthesis projects, JGI … research; the vast majority of projects fall into this category. Users are responsible for their own …
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Natural Prodcast Episode 2: The Primer, Part 2
… basic ideas of the science of natural products, and we dive into the very early history of the field. If you continue … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have … changes that nature has made. So secondary metabolism is adaptation of primary metabolism. They’re duplications of the …
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JGI announces 2025 Functional Genomics awardees
… research from scientists who translate genomic information into biological function. Through our  CSP Functional … the JGI's DNA synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions …
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The genome of Xylona heveae provides a window into fungal endophytism.
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … We focus our efforts on integrating database mining and sequence design with scaling the production of large, … activities using phylogenomic driven approaches, and understanding the design principles for successfully …
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Metabolomics Technology Group
… to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is understanding the distributed and dynamic metabolite …
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