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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint … and then use computational tools to analyze biosynthetic gene clusters and then develop them for a range of … State University is interested in developing mutant populations of the bioenergy feedstock crop  Camelina sativa …
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Natural Prodcast Episode 10: A Primer on Genome Mining
ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … for people, but also those molecules that mediate a well functioning ecosystem and environment and earth. So yeah, … that are no longer needed would end up being purged from populations. And that would go for chemistries as well. DAN …
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2021 Progress Report
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Special Initiatives & Programs
… and 200 polar/500 nonpolar metabolomics samples, and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … are strongly encouraged to contact the JGI to determine general feasibility prior to submitting a BER proposal that …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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FICUS
… on an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range … the capabilities across at least two of the facilities, and generate datasets beyond what each of these facilities could generate by itself.   Accepted projects must address or be …
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Natural Prodcast Episode 15: Katherine Duncan
I was imagining some massive contraption for amplifying genes. I wasn’t really sure what actinobacteria were. Dan … to you, but they’re unprecedented in the terms biosynthetic gene clusters and genome size. And they’re so complex. … of those within that cluster, you can begin to infer the function of the other molecules. Dan Udwary: Yeah, it’s– …
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Synthetic Biology Lab
We also develop methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and … design principles for successfully engineering pathways to function in heterologous hosts, by combining combinatorial …
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Work With the JGI! Tips for a Winning CSP Proposal
… project manager Miranda Harmon-Smith, who helps shepherd CSP projects along. …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… calls. Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … and the soybean sudden death pathogen. In the genes-to-function focus area, Daniel Kliebenstein from the University …
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Natural Prodcast Episode 6: Marc Chevrette
… and wondering what those … what those were and how they function. So I worked on a team at the Broad that was … that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their … of many different things in microbiology and biology in general. And her efforts first at Yale and now at University …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … said, the 1000 Fungal Genomes project, together with other CSP projects, had sequenced over 2,000 fungal genomes. The …
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