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… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk about JGI’s vision for secondary metabolism, his past in industry … heard me speak recently have heard me talk about the new data portal that we’re building. And I’ve been eager to …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data sharing to accelerate discovery and maximize the … to engage the community to inform necessary changes to JGI data policies. Since completion of the HGP, the JGI has …

… an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a … sampling of fungi, laboratory analysis and genomics data exploration. … The Mycocosm web portal provides data access, visualization, and analysis tools for …

… do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … massive problems just as much as it brings about massive data into really interesting ways to look at our systems. … figuring out how to filter out noise from the metabolomics data. We’ve done a lot of work learning about how to use …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … is challenging and often results in highly fragmented data, which limits the ability of researchers to accurately …

… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … hardware and worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was …

… One of the JGI’s key assets is our user community, comprising a broad … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life cycle, and embeds metadata and its curation in our …

… train students and professors in laboratory techniques and data analyses compile original data for improving fungal genomic resources empower students … fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages …

… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI … event. “The tools we use to process and analyze these data are diverse and porting these codes to GPUs present …

…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …

… that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the … immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, …