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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked … Sequencing Projects and Analysis Projects. Each of these entities are curated with a wide range of …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … basic ways. In “autopolyploids”, genome duplication occurs within a single species. By contrast, “allopolyploids” arise … doubling. In allopolyploids, the set of chromosomes from each ancestor is called a subgenome. Session and Rokhsar, …
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You Can Move, But You Can’t Hide
… Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … chemicals. They can also affect ecosystems by killing other cells. Over time, MGEs can help microbes gain a competitive edge within an ecosystem. They influence the composition of the …
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Multi-Omics Driven Metabolic Network Reconstruction and Analysis of Lignocellulosic Carbon Utilization in Rhodosporidium toruloides
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Introducing New Members of the JGI User Executive Committee
… on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist Gilbert at the University of California … to be an advocate helping both the scientific and education communities access and build on the JGI’s resources. The UEC …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the … represents the sets of chromosomes inherited from each parent. It also has 700-fold greater contiguity, … all the gene variants and how they interact with each other could help tree breeders execute more targeted …
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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Mesophilic and Thermophilic Conditions Select for Unique but Highly Parallel Microbial Communities to Perform Carboxylate Platform Biomass Conversion
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Microbial community analysis of three hydrocarbon reservoir cores provides valuable insights for the assessment of reservoir souring potential
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