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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational science and enable … to advance biotechnology. Mission  As a U.S. Department of Energy Office of Science user facility supported by the …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  …   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … Immediately following the NeLLi Symposium, join us for a 1.5–day jamboree on November 6–7 focused on improving …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock … A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … More genome copies in switchgrass leads to increased climate flexibility …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of … the fungal tree of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after … The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed under the Facilities Integrating Collaborations for …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with … language processing techniques to categorize genetic information. Learn more about their work here in a series of … Intern: Sidharth Babu (undergraduate) Mentor: Zhong Wang Click the image …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop … plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … address some of the most pressing challenges of our time. For more information, please visit  …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust … tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … address some of the most pressing challenges of our time. For more information, please visit  …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the … patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … address some of the most pressing challenges of our time. For more information, please visit  …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … Laboratory and the U.S. Department of Energy. Support for this research was also provided by the Great Lakes …
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