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The Power of One, Amplified
… that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome … of within species recombination, indicating variation in gene flow between the analyzed community members. The Impact … identified from microbial and metagenome sequence data sets generated from a handful of hot springs, including Dewar …
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The More the Merrier: Making the Case for Plant Pan-genomes
… of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process is ongoing and many … by the JGI’s  Community Science Program , the team generated reference genomes for  B. hybridum and  B. stacei …
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The Case for Conservation
… genomes’ metabolic pathways could lead to the discovery of genes that could be used for multiple biotechnological … moss sex chromosomes continue to evolve so rapidly in gene content and structure. He and JGI Plant Program head … improve crop breeding. For example, Schmutz noted, specific genes of interest could be associated with a plant’s sex. …
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Dan Rokhsar
… the Physics Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, … Genomics and Computational Biology … Education … Selected Publications … Awards and Honors …
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A Complex Confection Decoded: Sugarcane Reference Genome
… in  Nature by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of genes that provide resistance to the brown rust disease that … reference sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve …
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Matt Blow
University in 2005, where he studied RNA editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, … epigenome and other functional genomics datasets generated by JGI user science projects. … BS in Biochemistry … board member for Scientific Reports … Education … Selected Publications … Awards and Service …
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Uncovering Novel Genomes from Earth’s Microbiomes
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … A public repository of 52,515 microbial draft genomes generated from environmental samples around the world, … Value Beyond Genome Sequences Much of the data had been generated from environmental samples  sequenced by the JGI …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… microbiomes that influence algal diversity and gene expression. Sailing from pole to pole on four research … algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in order to determine what genes the algae were expressing, the team sequenced their …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … sequences (transcriptomes) from their soil samples. This gene expression dataset was particularly important for characterizing fungal genes, because, unlike bacteria, they often carry …
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Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps
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Cell by cell: population genetics in the wild
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Identification of mobile genetic elements with geNomad
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