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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of … Roth of the University of California, Berkeley aims to redesign and engineer algae by identifying the algal … such as the Copper River Delta wetland pond, cycle carbon. Using plots at the Harvard Forest long-term warming …
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not … relationships are long-term biological interactions between one or more biological organisms. One hallmark of an … analyses. The species harbors genes encoding SPEARE proteins—which contain  s erine  p roteas e ,  a dhesion …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a … help solve energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows … For a virus with a “head-tail” morphology, this means using proteins on its tail fibers to latch onto a specific target … only for viruses and other microbes , but for scientists. One emerging industry application of DGRs is to use them to …
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2024 Progress Report
… processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … sequencing, DNA synthesis and other omics technologies with computational analysis and prediction. Together, and in an … the structure and function of a unique cyanobacterial protein and understand its role in photosynthesis. In …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … the organisms on the list. They also searched IMG/M for all protein-coding genes belonging to each genome. The final … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … able to resolve the latter question, despite of their well-designed sampling and analysis of their data at the time. … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that … both carbon and nitrogen. This research team combined computational and experimental approaches to look at how … These enzymes are crucial for creating nucleic acids and proteins, as well as recycling nitrogen. Now, with insight …
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A novel open-source cultivation system helps establish the first full cycle chemosynthetic symbiosis model system involving the giant ciliate Zoothamnium niveum
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Sequencing Technologies
The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … watershed scale models to manage river ecosystems. One application for the information is the development of … use or water quality changes. Summary Rivers are key components of watershed ecosystems, where rain or snow drain …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … more quickly than even carbon dioxide. The EPA attributes one-fifth of all methane emissions to livestock and roughly … rumen microbes gave researchers access to a collection of novel enzymes — many of which contained interesting …
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