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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to … from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected place: … other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In … by sequencing genomes from across the fungal Tree of Life, but they also highlight the corresponding need to be … The work conducted by the US Department of Energy Joint Genome …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … was conducted by JGI Director Nigel Mouncey and research scientist Hiroshi Otani. Both are members of the JGI’s … by the U.S. Department of Energy Office of Science under Contract No. DE-AC02-05CH11231 …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility located at Lawrence Berkeley National Laboratory. Holly Bik of the University of Georgia, … of the JGI annual user meeting and New Lineages of Life symposia. Bik is a recipient of the Community Science …
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A Complex Confection Decoded: Sugarcane Reference Genome
… genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar … and https://doi.org/10.46936/10.25585/60001194) conducted by the USA Department of Energy (DOE) Joint Genome …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an … streamlines project management, laboratory information tracking, and enables efficient analysis and reporting of … Mr. Shahab has extensive experience in Laboratory Information Management Systems (LIMS), bioinformatics, and genomics …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … Cole, senior author of this work. Cole is a research scientist at the U.S. Department of Energy (DOE) Joint …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … 1000 reference genomes from across the fungal tree of life. Martin is one of the project leads. After starting …
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JGI User Executive Committee Expands
… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the … and capabilities that affect users. Robinson is a staff scientist at Los Alamos National Laboratory. With a …
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … of Energy, Office of Science, Office of Biological and Environmental Research, as part of the Quantitative Plant Science …
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