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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a … compared to the 2014 Eucalyptus grandis reference genome that has been widely adopted. The new genome assembly … of eucalyptus. The trees are fast-growing plantation crops that supply wood and fiber for various industrial uses …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. … Filling in the Plant Tree of Life …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … architecture with Y chromosomes in mammals: a structure that helps correct deleterious mutations. The Impact Shrub …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … the evolutionary past may hold key insights. The way that plants process nutrients has a rich back story — they …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   … al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . Science. 2006 Sep …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth … 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area counties. The JGI, located at … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… Program presents… Eyes on the Prize – Launching & Sustaining Startups in Synthetic Biology Who’s Invited? All … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and soybeans are used to produce … crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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Webinar: Introducing the BioSANS capability
… The BioSANS instrument is at the Center for Structural Molecular Biology … the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the Biological Small-Angle Neutron Scattering … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the … its user community to NCBI as well as to the  data portals that the JGI manages, immediately after data processing. The … have discussed a path forward for SRA, and GenBank records that are under JGI use restrictions to be moved to private …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … the release of MetaHipMer, an end-to-end genome assembler that supports “an unprecedented assembly of environmental … this year by assembling a collection of large datasets that will enable scientists to explore and collect data in …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE or … Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses. These … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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