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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Tracing the Evolution of Shiitake Mushrooms
… genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new … samples, this study also tracks the enzymes these fungi use to break down wood, and compares genetic diversity … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … Edward Lu and mentor Miguel Romero Sean Saki and mentors  Zhong Wang and Bryce Foster Sivagunalan Thamilarasan and … in the government lab. And I find this really valuable because in this time that I’ve been in my PhD program, I’ve been …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in … Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell methods to …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to bring together a “Viral … on how to best capture and characterize uncultivated viruses, understand the role of viruses in natural ecosystems, …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Refining the Process of Identifying Algae Biotechnology Candidates
… biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they can grow, and then harvest for use as biofuels and other bioproducts. As any good cook … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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Jeremy Schmutz
… working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed … human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based …
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