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… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and stimulate a … provide a wide range of benefits, but it also requires a deep understanding of biological systems. The JGI strategic … solutions, the JGI is well-positioned to provide users with capabilities to create genomics-enabled insights into a …

… can have a significant impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden … auxiliary metabolic genes (AMGs) that have nothing to do with a virus’ primary focus — replicating itself.  Chitin is …

… poorly-studied algal and viral genomes, and integrate with key DOE Office of Biological and Environmental Research … species. Many fungi have beneficial symbiotic relationships with plants and bacteria; in many instances, fungal … Bushley of the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how …

… of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … the researchers insights into how they might interact with their hosts, and how those interactions may in turn … been co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …

… users to explore data and share reproducible analyses with collaborators and the broader community. The approved … discovery for the control of plant pathogens, partnering with 600 instructors worldwide who work with more than … Eric Wommack of the University of Delaware is interested in learning how environmental conditions influence viral-host …

… on the scientific questions asked and whether they are within DOE mission areas of bioenergy, carbon cycling, and … https://phycocosm.jgi.doe.gov/oomycota ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups … to use the Browse page tool to compare your own data with the JGI database? A: You can use custom tracks menu …

… April 2024 — through serving an increased number of users with a record output of products, making data easier to … number of primary users — 2,456 — had active proposals with us, along with more than 15,000 secondary users who made use of our … Our primary objective is to serve our user community with large-scale advanced genomic capabilities. This year we …

… root cells. The fungus is almost always found among and within poplar trees, and in an effort to understand its … how poplar responds to its intimate associations with endophytes — a group whose effects on plants are still … poplar growth, the team compared poplar cuttings grown with and without an inoculation of the  M. elongata strain …

… strains. (Blake Rasor) Think of cells as tiny factories: within their walls they have both the machinery to make … University describe a two-pronged approach that starts with engineered yeast cells but then moves out of the cell … products in industry.” From Cell to “Soup” The work started with yeast strains engineered by Alper’s team to convert the …

… and recaps of all three keynote talks follow, starting with Bruce Hungate. Other videos of talks from the JGI … like poetry.” True to the introduction, Hungate spoke with real enthusiasm, even delight. He qualified his talk … Annual Meeting, Holmes discussed how to use genomics and metagenomics to better understand what is called the “virus …

… a decade, researchers around the world have collaborated with the U.S. Department of Energy (DOE) Joint Genome … on Actinobacteria ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found in marine and … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very …

… JGI researcher, Zhong Wang, have adjunct faculty positions with the SNS, and Wang’s group was hosting another QSB … for building and maintaining cells through the use of deep-sequencing technologies. The internship program was … trillion base data sets on daily basis.” As part of their learning experience, the students had to give a presentation …