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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC … with research interests in computational biology, I was especially intrigued by this program, as it will foster … take place on the UC Merced campus in late October or early November, at which time they will receive certificates. With …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to … community from geothermal hot springs, they uncovered a novel cellulose-degrading bacterium typically found in low …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a … Photosynthesis harnesses carbon captured from the atmosphere in a process that generates energy. The MPI team … library remains a foundational asset that allows them to innovate by screening for well-performing CO2-fixing enzymes …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to study … environment and transfer that ability into industry, specifically to generate biofuels,” Hess said.  (Only 90 of …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … feedstocks. Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing … exist. During the course of evolution, algal organisms sprung up in almost all branches of eukaryotes (organisms …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … feedstocks. Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing … exist. During the course of evolution, algal organisms sprung up in almost all branches of eukaryotes (organisms …
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A Complex Confection Decoded: Sugarcane Reference Genome
Sugarcane was the last major crop without a reference quality genome and now …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing … actually started doing when starting the lab. It has been, especially from an early career perspective, been absolutely instrumental in a lot of the work …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data … a previous effort, an international consortium recommended specific guidelines and best practices for characterizing … grant #2016/23218-0 from São Paulo Research Foundation (FAPESP). A.P.C. received a scholarship #2018/04240-0 from …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against … scientists have identified at least 15 zealexins, they suspect there are even more to find. Zealexins are produced in … would also act on native substrates to produce additional novel antibiotics. Summary The zealexins are chemically …
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