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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … to a genomic DNA library. “It’s an innovative way to rapidly capture the binding location for most transcription … could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the main source of …
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JGI announces first round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … Below find a list of the first 10 researchers accepted for 2023. Proposals are accepted year-round; the next review …
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Webinar: Introducing the BioSANS capability
… Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory … Foston, Washington University in St. Louis on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can browse the …
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A Shrubbier Version of Rubber
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … Science Program (CSP) .  Through this collaboration, in 2017, they published the first genome sequence of a … metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing that zinc has allowed …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … of archaea called  Euryarchaeota . These ancient, single-celled organisms thrive in most  environments devoid of … methane,” Hatzenpicher continued. “These [newly discovered cells] have very simple pathways. There are different ways …
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JGI announces second round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … under our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. Proposals are accepted year-round; the next review …
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The JGI Data Portal: Improving User Experience
… from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of …
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JGI Accepts 17 Proposals for Community Science Program
… Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … tree species that are widely grown as feedstocks for lignocellulosic and other biorefinery products. The work builds … interactions on the Amazon forest floor. Alicia Purcell of Northern Arizona University is studying microbial …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Chen, Jay Chen, Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … are engineering next-generation feedstocks through CRISPR-edited poplars with optimized lignin, engineering …
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