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… Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding … for the wider Berkeley Lab. “We’re shifting now to our net-zero strategy. And so we’re looking at the overall greenhouse gas impacts from all of our operations,” said Brie Fulton, program manager for  …

… more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … key to better understanding all the organisms that live in our immediate microbiome. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …

… Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for … The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … and environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, from alpine …

… junk DNA, so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many more … sectors and it is still seen today as a massive feat in science and collaboration. In closing his presentation, … Todd Anderson currently works to support understanding of plants, microbes and environmental communities that have …

… deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the … (IMG/M) portal. The study,  published in the  Microbiome journal, broadens our understanding of the unique microorganisms and … This work was funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, …

… mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities … National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user facility at Berkeley … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, …

… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with light and …

… characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report the discovery of miniature … of thermostable Cas9 genes . The work also used resources at the National Energy Research Scientific Computing … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science …

… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … genetic material with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …

… allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley National … who led the research team and is the head of the Viral Genomics group at the JGI, thinks that if you’re a virus or …

… launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for … limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made … and NMDC? A: We have reached out to KBase regarding use of our search API. They have expressed an interest in using …