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… The JGI is represented at conferences year round; find out where … researchers will be presenting next. Learn about upcoming user-focused webinars and workshops we're hosting. …

…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … capability for Auxenochlorella means engineers can produce new bioproducts in a more predictable and reliable manner. … in other algae, this organism lets scientists place new genes precisely where intended due to its capacity for …

… chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … of multiple omics data from various environments — that JGI users can leverage to create a more complete picture of … promoter sequences within these gene clusters, offering new regulatory targets for engineering efforts. Importantly, …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … mycorrhizal species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, … can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, … Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time series …

… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant Pandey of CRD). The …

… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … scope of work was established before he began, Lawrence remembers lots of flexibility as his internship and … mediate Sphagnum peatmoss resilience to warming . New Phytol. 2022 Jun;234(6):2111-2125. doi: …

… from The Ohio State University and the University of Michigan studying how virus infections cause significant … in part by the  Facilities Integrating Collaborations for User Science (FICUS) collaborative science initiative … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … no. 101001675-ORIGINS) and from the FRM/FSER (FRM/FSER202302017064) to P.-M.D., from the CNRS to P.-M.D. and H.P. …

… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolized in filamentous fungi. The work also suggests a new approach to gene annotation, which then can be explored …

… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … of 328 “high quality” (based on completeness) diverse new virophage genomes containing all four core genes. These …

… Every year, the JGI sequences around 35,000 samples — from plants, algae, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — but not doors — and robots handle a bunch of benchwork. …