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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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Honey Bee Gut Microbiota Divvy Up Dinner
… findings in the  Proceedings of the National Academy of Sciences . The team focused on the dominant bacterial clades …   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… industry, and government organizations for three days of scientific presentation, interactive panel discussions, workshops, and informal networking events. JGI will present both a genome center talk and a tech talk. … about our user programs and how we can help advance your science. …
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Proteome reallocation enables the selective de novo biosynthesis of non-linear, branched-chain acetate esters
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was … by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, founders …
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De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave tequilana
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional …
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“A STEM career is in reach and accessible”
School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth in the Bay Area with … participation in higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and … data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of …
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