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From Berkeley to Binghamton: Tracking Strawberry Evolution
… with: Until they came up with this new method, Session mentioned that the analysis for determining the evolutionary … and said ‘whichever gene you’re the closest to is the one I’m going to say you evolved from’,” he said. “This … strawberries you find at the market.” Session credited his time with Rokhsar (both during and after his time at the …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… mentors, alumni, and other JGI staff, Mouncey explained: “One of the hallmarks of JGI is our diverse workforce and our … in genomics, including JGI, is not representative of the diversity in the population, especially here in California. … Jess Jarett, a postdoctoral fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, …
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The JGI announces 2024 awardees for our Community Science Program annual call
… Tesfaye Mengiste, Egbert Schwartz, Hannah Schulman, Bram Stone and Jana Voriskovaa The JGI is excited to announce the …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… By tracking gene activity and chemical output over time, the team mapped how the bacterium redirects its … begins on the genome. This revealed a sweeping cellular response: The bacterium absorbs potassium ions to … stress. Unexpectedly, the increased salinity caused the cell to consume phosphate from its environment more quickly …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… surrounding the root) samples from the plants at the same time each week over the full life cycle of the plant. The … For the study, the team grew two sorghum varieties: one that tolerates better pre-flowering drought stress and a … better after flowering. All plants were subjected to one of three conditions during their lifecycles. In the …
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Honey Bee Gut Microbiota Divvy Up Dinner
… when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … absorbable solution of sugars. But pollen contains plant cell walls, which have complex, branching chains of … it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut microbiota to produce these …
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JGI@25: Solving the Mystery of the Missing Oil
… Ridge National Laboratory Governor’s Chair, noted that one of the biggest questions was the mystery of the missing … at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab collaborations. The JGI’s single cell genomics expertise led to the identification of a new …
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JGI-UC Merced Interns Share Their 2021 Experiences
… JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in … new skills needed for their PhD research. And for the first time in this program’s history, two interns returned to … Cross Species Integration of Single Cell Transcriptomes …
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Comparative Analysis of 126 Cyanobacterial Genomes Reveals Evidence of Functional Diversity Among Homologs of the Redox-Regulated CP12 Protein    
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Genome‐Wide Association Study Identifies Candidate Loci Underlying Agronomic Traits in a Middle American Diversity Panel of Common Bean
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Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain chemolithoautotrophy in heterogeneous environments
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Unveiling the viral frontier in a warming world: temperature as a key ecological driver of viral diversity in subantarctic Chilean Patagonia fjords
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