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2024 Progress Report
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Genome Sequence of Hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and Comparative Genomics with V. cholerae▿
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Rex Malmstrom
… stages of the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized …
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The JGI Data Portal: Improving User Experience
Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … all the data associated with the latest version of the plant portal, weren’t able to complete this task. Improving …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
Blow, and their team have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied … Ralstonia with enzymes that make phosphate bioavailable for plants. When these engineered bacteria were used with the model plant  Arabidopsis,  the plants grew better than when they …
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Eelgrass Proves to Be Much Younger Than We Thought
… believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading … Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time estimates for … due to the wide and varied geographic footprint of the plant, that eelgrass began colonizing the oceans  about 3 …
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Kjiersten Fagnan
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JGIota: Looking Back at Methane-Making Microbes
… from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported …
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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JGI on the 2021 Highly Cited Researchers List
… hosted two JGI Engagement Webinars promoting the JGI fungal data portal MycoCosm and the algal portal PhycoCosm. …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… could be generating these observed patterns. As many other plant species have natural cytotype variation, we also hoped … hundreds of naturally-occurring genotypes (in this case, a plant’s complete genetic makeup) and 10 common gardens. We … like switchgrass respond to pronounced climate shifts. (C4 plants use a more efficient form of photosynthesis that …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… roles in both the carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause diseases, and produce antibiotics. …
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